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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs148353586 chr7:56014655 C/T 1.53E-10 405 15.3 15.93 7.8 KM Plot
LGG rs148436177 chr3:100916502 A/AG 4.71E-5 406 15.73 14.87 12.77 KM Plot
LGG rs148631861 chr4:84452180 A/AT 5.55E-16 406 14.93 18.13 5.17 KM Plot
LGG rs149033966 chr7:64929910 C/A 7.7E-8 394 15.32 15.28 2.27 KM Plot
LGG rs149067554 chr5:156032682 A/C 4.58E-5 407 16.73 14.12 10.53 KM Plot
LGG rs149207185 chr2:228075354 A/AT 0 406 15.72 14.43 1.23 KM Plot
LGG rs149335870 chr6:46934260 TTTAAG/T 1.51E-5 407 15.03 16.73 12.5 KM Plot
LGG rs149583442 chr19:23529915 A/AC 2.97E-6 407 15.3 15.63 7.8 KM Plot
LGG rs149596284 chr20:48454560 AAAT/A 7.95E-9 407 15.72 10.6 6.83 KM Plot
LGG rs149678033 chr9:95454812 C/T 0.000148 407 15.17 17.7 7.12 KM Plot
LGG rs149744862 chr7:64933745 T/G 1.21E-7 398 15.33 15.2 2.27 KM Plot
LGG rs149755497 chr15:31894506 C/T 0.000164 405 15.27 15.57 13.58 KM Plot
LGG rs149765280 chr7:64934134 C/T 9.18E-8 400 15.57 15.2 2.27 KM Plot
LGG rs150026197 chr1:219177366 CTCTTT/C 0.000173 406 14.77 19.03 18.63 KM Plot
LGG rs150196513 chr14:74343979 AT/A 0 405 14.92 16.9 1.23 KM Plot